# The Institute vault — what never enters git. # Rule: git tracks knowledge + code; heavy binaries live on disk and back up separately. # (Git LFS for scientific data — OpenSim meshes, checkpoints — is a later option.) # --- Python --- __pycache__/ *.py[cod] *.egg-info/ .venv/ venv/ .pytest_cache/ *.so # --- Scientific / engineering binaries --- *.vtu *.vtp *.stl *.obj *.osim # large OpenSim models; force-add small canonical ones with `git add -f` *.pt *.pth *.ckpt *.onnx *.npz *.h5 *.hdf5 # --- Media / renders (generated) --- *.mp4 *.gif *.mov *.png # generated renders; force-add canonical figures explicitly *.jpg *.jpeg *.tiff # --- LaTeX / build outputs (commit final manuscripts explicitly) --- build/ dist/ *.log *.aux *.out *.toc *.bbl *.blg *.synctex.gz *.fdb_latexmk *.fls *.pdf # --- OS / editor noise --- .DS_Store Thumbs.db *.swp .obsidian/workspace.json .obsidian/workspace-mobile.json # --- Local secrets --- .env *.local